vine-users ML アーカイブ



[vine-users:075552] Re: mpich のインストール失敗

Takami です。

中井様 お返事ありがとうございます。

> setenv F77 f77
> setenv MPI_FFLAGS "-f -N15"
> setenv MPI_F90FLAGS "-YALL_NAMES=LCS -YEXT_SFX=_"
> ./configure ....

の通りに実行しましたが、やはり何故か、/usr/local/mpich/bin 以下に
mpif90 や mpif77 が作成されません。mpicc とかの、C用のコンパイラーはちゃ
んと作成されているのですが…。

参考になるか分かりませんが、以下に、./cofigure のlogを添付します。

*************************  ここから ************************* 

Configuring MPICH2 version 1.0.5 with '-prefix=/usr/local/mpich' 'F77=f77'
Running on system: Linux orion 2.4.31-0vl1.12 #1 Mon Dec 26 22:22:09 JST 2005 i686 unknown
Executing mpich2prereq in /home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3 with 
Executing mpich2prereq in /home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock
sourcing /home/astro1/takami/hoge/mpich2-1.0.5/src/pm/mpd/mpich2prereq
sourcing /home/astro1/takami/hoge/mpich2-1.0.5/src/pm/mpd/setup_pm
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for type of weak symbol support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking for multiple weak symbol support... yes
checking whether we are using the GNU Fortran 77 compiler... no
checking whether f77 accepts -g... yes
checking how to get verbose linking output from f77... -v
checking for Fortran libraries of f77...  -L/opt/absoft/lib -lf90math -lfio -lf77math -lm
checking whether C can link with  -L/opt/absoft/lib -lf90math -lfio -lf77math -lm... yes
checking for linker for Fortran main programs... Use Fortran to link programs
checking for Fortran 77 name mangling... mixed
checking what libraries are needed to link Fortran programs with C routines that use stdio... none
configure: WARNING: The compiler f77 uses mixed case names.  Fortran is monocase
and many Fortran programs may use either upper or lower case names for MPI
calls.  Consider specifying a particular parameter to your Fortran compiler
to select either upper or lower case names.  For the Absoft compiler,
-f selects lower case and -N109 selects upper case (if you use -f, also use
-B108 to enable the iargc and getarg routines, which are needed for some
tests and by many user programs).  Specify new command
line options by setting the environment variable FFLAGS to include
the options (e.g., setenv FFLAGS "-f -B108").  In addition, make sure that your
Fortran 90 compiler uses a compatible naming choice.  For the
Absoft Fortran 90, -YALL_NAMES=LCS selects lower case names and -B108
adds underscores to names, as required for iargc and getarg.  Pass this
information to configure with the F90FLAGS environment variable.
configure: WARNING: Turning off Fortran support because of mixed case names
checking for c++... c++
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking whether the compiler supports exceptions... yes
checking whether the compiler recognizes bool as a built-in type... yes
checking whether the compiler implements namespaces... yes
checking whether <iostream> available... yes
checking whether the compiler implements the namespace std... yes
checking whether <math> available... no
checking for GNU g++ version... 3 . 3
checking for perl... /usr/bin/perl
checking for ar... ar
checking for ranlib... ranlib
checking for etags... etags
checking for etags argument to specify language... --language=c
checking whether global variables handled properly... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether install works... yes
checking whether install breaks libraries... no
checking whether mkdir -p works... yes
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
checking for bash... /bin/sh
checking whether /bin/sh supports arrays... yes
checking for doctext... false
checking for location of doctext style files... unavailable
checking for an ANSI C-conforming const... yes
checking for volatile... yes
checking for restrict... __restrict
checking for inline... inline
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking whether byte ordering is bigendian... no
checking whether C compiler allows unaligned doubles... yes
Using gcc to determine dependencies
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for max C struct integer alignment... four
checking for max C struct floating point alignment... four
checking for max C struct alignment of structs with doubles... four
checking for max C struct floating point alignment with long doubles... four
checking if alignment of structs with doubles is based on position... no
checking if alignment of structs with long long ints is based on position... no
checking if double alignment breaks rules, find actual alignment... no
checking for alignment restrictions on pointers... int or better
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for char... yes
checking size of char... 1
checking for short... yes
checking size of short... 2
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long long... yes
checking size of long long... 8
checking for float... yes
checking size of float... 4
checking for double... yes
checking size of double... 8
checking for long double... yes
checking size of long double... 12
checking for wchar_t... yes
checking size of wchar_t... 4
checking for void *... yes
checking size of void *... 4
checking for size of float int... 8
checking for size of double int... 12
checking for size of long int... 8
checking for size of short int... 6
checking for size of 2 int... 8
checking for size of long double int... 16
checking for sys/bitypes.h... yes
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for bool... yes
checking size of bool... 1
checking how to run the C++ preprocessor... c++ -E
checking for complex... yes
checking for Complex... yes
checking size of Complex... 8
checking for DoubleComplex... yes
checking size of DoubleComplex... 16
checking for LongDoubleComplex... yes
checking size of LongDoubleComplex... 24
checking if char * pointers use byte addresses... yes
checking for alignment restrictions on int64_t... no
checking for alignment restrictions on int32_t... no
checking for size of MPI_BSEND_OVERHEAD... 59
checking for gcc __asm__ and pentium cmpxchgl instruction... yes
checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... no
checking for gcc __asm__ and IA64 xchg4 instruction... no
checking for ANSI C header files... (cached) yes
checking for stdlib.h... (cached) yes
checking for stdarg.h... yes
checking for sys/types.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for limits.h... yes
checking for stddef.h... yes
checking for errno.h... yes
checking for sys/socket.h... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for endian.h... yes
checking for sys/uio.h... yes
checking for size_t... yes
checking for setitimer... yes
checking for alarm... yes
checking for vsnprintf... yes
checking for vsprintf... yes
checking whether vsnprintf needs a declaration... no
checking for strerror... yes
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for va_copy... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for clock_gettime... no
checking for clock_getres... no
checking for gethrtime... no
checking for gettimeofday... yes
sourcing /home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/setup_device
RUNNING SETUP_DEVICE FOR THE CH3 DEVICE
sourcing /home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/setup_channel
RUNNING SETUP_CHANNEL FOR THE SOCK CHANNEL
sourcing /home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/setup
RUNNING SETUP FOR THE SOCK INTERFACE
checking for pthread.h... yes
checking for pthread_yield... no
checking for library containing pthread_key_create... -lpthread
checking for sched_yield... yes
checking for yield... no
checking for usleep... yes
checking for sleep... yes
checking for select... yes
RUNNING CONFIGURE FOR CH3 DEVICE
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for assert.h... yes
checking for limits.h... yes
checking for string.h... yes
checking for sys/types.h... yes
checking for sys/uio.h... yes
checking for uuid/uuid.h... no
checking for time.h... yes
checking for ctype.h... yes
checking for unistd.h... yes
checking for arpa/inet.h... yes
checking for sys/socket.h... yes
checking for net/if.h... yes
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... (cached) yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... (cached) yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... (cached) yes
checking for pid_t... yes
checking for inet_pton... yes
checking for gethostname... yes
checking whether gethostname needs a declaration... no
checking for CFUUIDCreate... no
checking for uuid_generate... no
checking for time... yes
checking for library containing uuid_generate... no
checking whether CPP accepts variable length argument lists... yes
checking whether byte ordering is bigendian... no
checking whether we can use struct ifconf... yes
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long long... yes
checking size of long long... 8
checking for void *... yes
checking size of void *... 4
checking for etags... etags
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating util/Makefile
config.status: creating util/sock/Makefile
config.status: creating util/shm/Makefile
config.status: creating util/shmbase/Makefile
config.status: creating channels/Makefile
config.status: creating localdefs
config.status: creating include/mpid_thread.h
config.status: creating include/mpidi_ch3_conf.h
config.status: executing default-1 commands
copying /home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/../common/thread/mpid_thread_mpe.c to src/mpid_thread.c
configure: configuring in channels/sock
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock
RUNNING CONFIGURE FOR THE SOCK CHANNEL
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for net/if.h... yes
checking how to run the C preprocessor... gcc -E
checking for netdb.h... yes
checking for sys/ioctl.h... yes
checking for sys/socket.h... yes
checking for sys/sockio.h... no
checking for sys/types.h... yes
checking for errno.h... yes
checking for netinet/in.h... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating localdefs
config.status: creating include/mpidi_ch3i_sock_conf.h
RUNNING CONFIGURE FOR THE SOCK INTERFACE
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating mpidu_sock_conf.h
configure: configuring in poll
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll
RUNNING CONFIGURE FOR THE POLL IMPLEMENTATION OF SOCK
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for inline... inline
checking for poll... yes
checking how to run the C preprocessor... gcc -E
checking for assert.h... yes
checking for errno.h... yes
checking for fcntl.h... yes
checking for limits.h... yes
checking for netdb.h... yes
checking for netinet/in.h... yes
checking for netinet/tcp.h... yes
checking for poll.h... yes
checking for stdlib.h... yes
checking for sys/param.h... yes
checking for sys/poll.h... yes
checking for sys/types.h... yes
checking for sys/uio.h... yes
checking for unistd.h... yes
checking if struct poll is defined... yes
checking if a simple program using poll() can be compiled... yes
checking whether bit fields work in ip.h... yes
checking for gethostname... yes
checking whether gethostname needs a declaration... no
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking whether socklen_t is defined (in sys/socket.h if present)... yes
checking for etags... etags
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating mpidu_socki_conf.h
Configuring with args --prefix=/usr/local/mpich F77=f77
checking for architecture... LINUX
ROMIO home directory is /home/astro1/takami/hoge/mpich2-1.0.5/src/mpi/romio
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking whether we are using the GNU Fortran 77 compiler... no
checking whether f77 accepts -g... yes
checking how to run the C preprocessor... gcc -E
checking for memalign... yes
checking Fortran external names
Fortran externals are lower case
checking for inline... inline
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for unistd.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for int... yes
checking size of int... 4
checking for void *... yes
checking size of void *... 4
checking for int large enough for pointers... yes
checking for long long... yes
checking size of long long... 8
checking for f90... f90
checking for extension for Fortran 90 programs... f90
checking for Fortran 90 KIND parameter for 8-byte integers...    8
checking that we can use integer*8 to declare MPI_DISPLACMENT_CURRENT... yes
Overriding Array test for MPICH2
checking for weak symbol support... pragma weak
checking that weak symbols are visible to other files... yes
checking that the compiler correctly implements weak symbols... yes
checking whether struct flock compatible with MPI_Offset... yes
checking for pvfs2-config... notfound
checking configured file systems... testfs ufs nfs
configure: WARNING: File locks may not work with NFS.  See the Installation and
users manual for instructions on testing and if necessary fixing this
checking for library containing aio_write... -lrt
checking signal.h usability... yes
checking signal.h presence... yes
checking for signal.h... yes
checking if aio.h exists and can be compiled... yes
checking if sys/aio.h exists and can be compiled... no
checking whether aio routines can be used... yes
checking for obsolete two-argument aio_write... no
checking for obsolete two-argument aio_suspend... no
checking for aio_fildes member of aiocb structure... yes
checking for aio_whence member of aiocb structure... no
checking for aio_handle member of aiocb structure... no
checking for aio_reqprio member of aiocb structure... yes
checking for aio_sigevent member of aiocb structure... yes
checking sys/vfs.h usability... yes
checking sys/vfs.h presence... yes
checking for sys/vfs.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/mount.h usability... yes
checking sys/mount.h presence... yes
checking for sys/mount.h... yes
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking whether struct statfs properly defined... yes
checking for f_fstypename member of statfs structure... no
checking for sys/stat.h... (cached) yes
checking for sys/types.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stat... yes
checking for st_fstype member of stat structure... no
checking for sys/types.h... (cached) yes
checking for sys/statvfs.h... (cached) yes
checking for sys/vfs.h... (cached) yes
checking for statvfs... yes
checking for f_basetype member of statvfs structure... no
checking for unistd.h... (cached) yes
checking for large file defines... yes
checking whether off64_t is an scalar type... yes
checking for strerror... yes
checking for doctext... false
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for lstat... yes
checking whether lstat needs a declaration... yes
checking for readlink... yes
checking whether readlink needs a declaration... no
checking for fsync... yes
checking whether fsync needs a declaration... no
checking for ftruncate... yes
checking whether ftruncate needs a declaration... no
checking for restrict... __restrict
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
setting CC to gcc
setting F77 to f77
setting TEST_CC to /home/astro1/takami/hoge/tmp_mpich/bin/mpicc
setting TEST_F77 to /home/astro1/takami/hoge/tmp_mpich/bin/mpif77
setting CFLAGS to  -O -DFORTRANNOUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H
setting USER_CFLAGS to 
setting USER_FFLAGS to 
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating mpi-io/Makefile
config.status: creating mpi2-other/info/Makefile
config.status: creating mpi2-other/array/Makefile
config.status: creating adio/common/Makefile
config.status: creating test/Makefile
config.status: creating test/misc.c
config.status: creating test/large_file.c
config.status: creating test/runtests
config.status: creating util/romioinstall
config.status: creating include/mpio.h
config.status: creating include/mpiof.h
config.status: creating adio/ad_nfs/Makefile
config.status: creating adio/ad_ufs/Makefile
config.status: creating adio/ad_panfs/Makefile
config.status: creating adio/ad_xfs/Makefile
config.status: creating adio/ad_sfs/Makefile
config.status: creating adio/ad_pfs/Makefile
config.status: creating adio/ad_testfs/Makefile
config.status: creating adio/ad_pvfs/Makefile
config.status: creating adio/ad_pvfs2/Makefile
config.status: creating adio/ad_gridftp/Makefile
config.status: creating mpi-io/fortran/Makefile
config.status: creating mpi2-other/info/fortran/Makefile
config.status: creating mpi2-other/array/fortran/Makefile
config.status: creating test/fmisc.f
config.status: creating test/fcoll_test.f
config.status: creating test/pfcoll_test.f
config.status: creating test/fperf.f
config.status: creating mpi-io/glue/mpich2/Makefile
config.status: creating mpi-io/glue/mpich1/Makefile
config.status: creating mpi-io/glue/default/Makefile
config.status: creating adio/include/romioconf.h
config.status: executing default-1 commands
RUNNING CONFIGURE FOR THE SIMPLE PMI
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for unistd.h... yes
checking for string.h... yes
checking for stdlib.h... yes
checking for sys/socket.h... yes
checking for strings.h... yes
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for sys/types.h... yes
checking for sys/param.h... yes
checking for sys/socket.h... (cached) yes
checking for netinet/in.h... yes
checking for netinet/tcp.h... yes
checking for sys/un.h... yes
checking for netdb.h... yes
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for socket... yes
checking for setsockopt... yes
checking for gethostbyname... yes
checking whether socklen_t is defined (in sys/socket.h if present)... yes
checking whether struct hostent contains h_addr_list... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating pmiconf.h
Configuring with args --prefix=/usr/local/mpich F77=f77
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking whether make sets $(MAKE)... yes
checking whether ln -s works... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether install /usr/bin/install -c works... yes
Using INSTALL=/usr/bin/install -c
checking for totalview... no
checking for python2.5... no
checking for python2.4... no
checking for python2.3... python2.3
checking for python2.2... no
checking for python2... python2
checking for python... python
checking that python2.3 is a valid python version... yes
checking that the cPickle module is available for python2.3... yes
checking for library containing socket... none required
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking for strings.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for stdlib.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking for putenv... yes
checking for socket... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating mpdconf.h
Configuring MPE Profiling System with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
This MPE build is part of the MPICH2 build
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking whether MPI_CC has been set ... /home/astro1/takami/hoge/tmp_mpich/bin/mpicc 
checking whether we are using the GNU Fortran 77 compiler... no
checking whether f77 accepts -g... yes
checking whether MPI_F77 has been set ... /home/astro1/takami/hoge/tmp_mpich/bin/mpif77 
checking how to get verbose linking output from f77... -v
checking for Fortran libraries of f77...  -L/opt/absoft/lib -lpthread -lrt -lf90math -lfio -lf77math -lm
checking whether C can link with  -L/opt/absoft/lib -lpthread -lrt -lf90math -lfio -lf77math -lm... yes
checking for Fortran 77 name mangling... mixed
checking for Fortran 77 flag for library directories... -L
checking for include directory flag for Fortran... -I
checking how to run the C preprocessor... gcc -E
checking whether ln -s works... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether install works... yes
checking for ranlib... ranlib
checking whether install breaks libraries... no
checking for leftover Makefiles in subpackages ... none 
configure: creating ./config.status
config.status: creating Makefile
config.status: creating sbin/mpetestlink
config.status: creating sbin/mpetestexec
config.status: creating sbin/mpetestexeclog
config.status: creating sbin/mpeinstall
config.status: creating sbin/mpecheckinstall
config.status: creating sbin/mpecheckbuild
config.status: creating etc/mpe_help.conf
config.status: creating etc/mpe_f77env.conf
config.status: creating mpe_conf.h
config.status: executing default-1 commands
configure: configuring in src/misc
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/misc/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/misc
Configuring MPE Miscellaneous Library with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/misc'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ar... ar
checking for ranlib... ranlib
checking how to run the C preprocessor... gcc -E
checking for dbx... no
checking for gdb... no
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for an ANSI C-conforming const... yes
checking for sysinfo... yes
checking for uname... yes
checking for gethostbyname... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for unistd.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking sys/systeminfo.h usability... no
checking sys/systeminfo.h presence... no
checking for sys/systeminfo.h... no
checking for sighandler_t... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/dbxerr.c
config.status: creating mpe_misc_conf.h
configure: configuring in src/logging
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/logging/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/logging
Configuring MPE Logging Library and Tools with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/logging'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ar... ar
checking for ranlib... ranlib
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for an ANSI C-conforming const... yes
checking whether byte ordering is bigendian... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for sys/types.h... (cached) yes
checking sys/bitypes.h usability... yes
checking sys/bitypes.h presence... yes
checking for sys/bitypes.h... yes
checking for header that defines C99 integer types, intXX_t ... <stdint.h> 
checking for inttypes.h... (cached) yes
checking whether <inttypes.h> defines the PRIdXX macros ... yes
checking if <stdint.h> can be behind system headers ... yes
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for mkstemp... yes
checking whether mkstemp needs a declaration... no
checking for srand48... yes
checking whether srand48 needs a declaration... no
checking for lrand48... yes
checking whether lrand48 needs a declaration... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for _LARGE_FILES value needed for large files... no
checking whether _LARGEFILE64_SOURCE is needed ... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking for O_BINARY for open() ... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating include/clog_inttypes.h
config.status: creating etc/mpe_log.conf
config.status: creating etc/mpe_nolog.conf
config.status: creating mpe_logging_conf.h
configure: configuring in src/wrappers
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/wrappers/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/wrappers
Configuring MPE wrapper Library For MPI with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/wrappers'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ar... ar
checking for ranlib... ranlib
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for an ANSI C-conforming const... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for stdarg is correct... yes
checking if compiler accepts prototypes ... yes
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for safe PMPI invocations ... no
checking for the value of MPI_STATUS_SIZE ... configure: WARNING:  Undefined MPI_STATUS_SIZE in MPICH-2! Exiting...  
configure: configuring in src/graphics
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/graphics/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/graphics
Configuring MPE X Graphics Library with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/graphics'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ar... ar
checking for ranlib... ranlib
checking how to run the C preprocessor... gcc -E
checking for X... libraries /usr/X11R6/lib, headers /usr/X11R6/include
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for an ANSI C-conforming const... yes
checking for long pointers... no
checking for system... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for unistd.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating contrib/life/Makefile
config.status: creating contrib/mandel/Makefile
config.status: creating contrib/mastermind/Makefile
config.status: creating contrib/test/Makefile
config.status: creating etc/mpe_mpianim.conf
config.status: creating etc/mpe_graphics.conf
config.status: creating mpe_graphics_conf.h
configure: configuring in src/collchk
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/collchk/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/collchk
Configuring MPE Collective and Datatype Checking Library with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/collchk'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ar... ar
checking for ranlib... ranlib
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for an ANSI C-conforming const... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for unistd.h... (cached) yes
checking for working alloca.h... yes
checking for alloca... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating etc/mpe_mpicheck.conf
config.status: creating mpe_collchk_conf.h
configure: configuring in src/slog2sdk
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/slog2sdk/configure' --prefix=/usr/local/mpich  '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/slog2sdk
Configuring SLOG2SDK with '--prefix=/usr/local/mpich' 'F77=f77' 'CC=gcc' 'CFLAGS=' 'CPPFLAGS= -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/datatype -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/datatype -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/ch3/channels/sock/include -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock -I/home/astro1/takami/hoge/tmp_mpich/src/mpid/common/sock/poll -I/home/astro1/takami/hoge/mpich2-1.0.5/src/mpid/common/sock/poll' 'FFLAGS=' 'MPI_CC=/home/astro1/takami/hoge/tmp_mpich/bin/mpicc' 'MPI_F77=/home/astro1/takami/hoge/tmp_mpich/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/src/mpe2/src/slog2sdk'
checking gnumake... yes using --no-print-directory
checking BSD 4.4 make... no - whew
checking OSF V3 make... no
checking for virtual path format... VPATH
checking for a BSD-compatible install... /usr/bin/install -c
checking whether install works... yes
checking if CLASSPATH is set... no, good to go
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for java in user's PATH... not found
checking for java in known locations... not found
configure: WARNING:  No Java Virtual Machine can be found anywhere! 
MPE2:  "src/misc" "src/logging" "src/graphics" "src/collchk" have been configured
configure: WARNING: Could not define Fortran MPI datatypes for C
checking the sizeof MPI_Offset... 8
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/mpichtimer.h
config.status: creating src/binding/Makefile
config.status: creating src/binding/cxx/Makefile
config.status: creating src/binding/cxx/mpicxx.h
config.status: creating src/binding/f77/Makefile
config.status: creating src/binding/f77/mpif.h
config.status: creating src/binding/f77/setbotf.f
config.status: creating src/binding/f90/Makefile
config.status: creating src/binding/f90/mpi_sizeofs.f90
config.status: creating src/env/mpicc
config.status: creating src/env/mpicc.conf
config.status: creating src/env/mpicc.bash
config.status: creating src/env/mpicxx
config.status: creating src/env/mpicxx.conf
config.status: creating src/env/mpicxx.bash
config.status: creating src/env/mpif77
config.status: creating src/env/mpif77.conf
config.status: creating src/env/mpif77.bash
config.status: creating src/env/mpif90
config.status: creating src/env/mpif90.conf
config.status: creating src/env/mpif90.bash
config.status: creating src/env/mpich2version
config.status: creating src/env/parkill
config.status: creating src/env/Makefile
config.status: creating src/util/createshlib
config.status: creating src/mpi/Makefile
config.status: creating src/mpi/attr/Makefile
config.status: creating src/mpi/coll/Makefile
config.status: creating src/mpi/comm/Makefile
config.status: creating src/mpi/datatype/Makefile
config.status: creating src/mpi/debugger/Makefile
config.status: creating src/mpi/errhan/Makefile
config.status: creating src/mpi/group/Makefile
config.status: creating src/mpi/init/Makefile
config.status: creating src/mpi/misc/Makefile
config.status: creating src/mpi/pt2pt/Makefile
config.status: creating src/mpi/rma/Makefile
config.status: creating src/mpi/spawn/Makefile
config.status: creating src/mpi/timer/Makefile
config.status: creating src/mpi/topo/Makefile
config.status: creating src/mpid/Makefile
config.status: creating src/mpid/common/Makefile
config.status: creating src/mpid/common/datatype/Makefile
config.status: creating src/mpid/common/locks/Makefile
config.status: creating src/pm/Makefile
config.status: creating src/pmi/Makefile
config.status: creating src/nameserv/Makefile
config.status: creating src/nameserv/file/Makefile
config.status: creating src/nameserv/mpd/Makefile
config.status: creating src/nameserv/pmi/Makefile
config.status: creating src/nameserv/test/Makefile
config.status: creating src/util/Makefile
config.status: creating src/util/info/Makefile
config.status: creating src/util/instrm/Makefile
config.status: creating src/util/thread/Makefile
config.status: creating src/util/thread/mpe_thread.h
config.status: creating src/util/mem/Makefile
config.status: creating src/util/msgs/Makefile
config.status: creating src/util/param/Makefile
config.status: creating src/util/dbg/Makefile
config.status: creating src/util/dbg/getfuncstack
config.status: creating src/util/osserv/Makefile
config.status: creating src/include/mpi.h
config.status: creating test/Makefile
config.status: creating test/util/Makefile
config.status: creating test/basic/Makefile
config.status: creating test/commands/Makefile
config.status: creating test/commands/cmdtests
config.status: creating test/mpid/Makefile
config.status: creating test/mpid/ch3/Makefile
config.status: creating examples/Makefile
config.status: creating examples/f77/Makefile
config.status: creating examples/f90/Makefile
config.status: creating examples/cxx/Makefile
config.status: creating src/util/logging/Makefile
config.status: creating src/util/logging/common/Makefile
config.status: creating doc/Makefile
config.status: creating doc/mansrc/Makefile
config.status: creating doc/mansrc/createhtmlindex
config.status: creating doc/refman/Makefile
config.status: creating doc/installguide/Makefile
config.status: creating doc/userguide/Makefile
config.status: creating doc/logging/Makefile
config.status: creating doc/design/Makefile
config.status: creating doc/smpd/Makefile
config.status: creating doc/windev/Makefile
config.status: creating src/include/mpichconf.h
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
config.status: executing default-4 commands
copying /home/astro1/takami/hoge/mpich2-1.0.5/src/util/thread/mpe_thread_posix.c to src/util/thread/mpe_thread.c
moving mpe_thread.h to src/include
config.status: executing default-5 commands
config.status: executing default-6 commands
config.status: executing default-7 commands
config.status: executing default-8 commands
config.status: executing default-9 commands
config.status: executing default-10 commands
config.status: executing default-11 commands
config.status: executing default-12 commands
config.status: executing default-13 commands
config.status: executing default-14 commands
config.status: executing default-15 commands
configure: configuring in test/mpi
configure: running /bin/sh '/home/astro1/takami/hoge/mpich2-1.0.5/test/mpi/configure' --prefix=/usr/local/mpich  '-prefix=/usr/local/mpich' 'F77=f77' --cache-file=/dev/null --srcdir=/home/astro1/takami/hoge/mpich2-1.0.5/test/mpi
RUNNING CONFIGURE FOR MPI TESTS
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... no
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for an ANSI C-conforming const... yes
checking for restrict... __restrict
checking how to run the C preprocessor... gcc -E
checking for unistd.h... yes
checking for stdarg.h... yes
checking for string.h... yes
checking for stdlib.h... yes
checking for memory.h... yes
Configuring tests for MPICH2
configure: WARNING: Selecting integer*8 as the Fortran type for MPI_Offset
configure: WARNING: Selecting integer as the Fortran type for MPI_Aint
checking whether <iostream> available... yes
checking whether the compiler implements namespaces... yes
checking whether the compiler implements the namespace std... yes
checking for perl... /usr/bin/perl
checking for etags... etags
configure: creating ./config.status
config.status: creating maint/testmerge
config.status: creating runtests
config.status: creating Makefile
config.status: creating basic/Makefile
config.status: creating attr/Makefile
config.status: creating util/Makefile
config.status: creating coll/Makefile
config.status: creating comm/Makefile
config.status: creating datatype/Makefile
config.status: creating errhan/Makefile
config.status: creating group/Makefile
config.status: creating info/Makefile
config.status: creating init/Makefile
config.status: creating pt2pt/Makefile
config.status: creating rma/Makefile
config.status: creating spawn/Makefile
config.status: creating topo/Makefile
config.status: creating io/Makefile
config.status: creating f77/Makefile
config.status: creating f77/attr/Makefile
config.status: creating f77/attr/attraints.h
config.status: creating f77/datatype/Makefile
config.status: creating f77/datatype/typeaints.h
config.status: creating f77/util/Makefile
config.status: creating f77/coll/Makefile
config.status: creating f77/comm/Makefile
config.status: creating f77/topo/Makefile
config.status: creating f77/init/Makefile
config.status: creating f77/rma/addsize.h
config.status: creating f77/pt2pt/Makefile
config.status: creating f77/info/Makefile
config.status: creating f77/spawn/Makefile
config.status: creating f77/spawn/type1aint.h
config.status: creating f77/rma/Makefile
config.status: creating f77/ext/Makefile
config.status: creating f77/ext/testlist
config.status: creating f77/io/Makefile
config.status: creating f77/io/iooffset.h
config.status: creating f77/io/iodisp.h
config.status: creating f77/io/ioaint.h
config.status: creating f90/Makefile
config.status: creating f90/attr/Makefile
config.status: creating f90/datatype/Makefile
config.status: creating f90/util/Makefile
config.status: creating f90/coll/Makefile
config.status: creating f90/comm/Makefile
config.status: creating f90/topo/Makefile
config.status: creating f90/init/Makefile
config.status: creating f90/pt2pt/Makefile
config.status: creating f90/rma/Makefile
config.status: creating f90/info/Makefile
config.status: creating f90/spawn/Makefile
config.status: creating f90/timer/Makefile
config.status: creating f90/ext/Makefile
config.status: creating f90/ext/testlist
config.status: creating f90/io/Makefile
config.status: creating f90/misc/Makefile
config.status: creating cxx/Makefile
config.status: creating cxx/util/Makefile
config.status: creating cxx/attr/Makefile
config.status: creating cxx/comm/Makefile
config.status: creating cxx/coll/Makefile
config.status: creating cxx/info/Makefile
config.status: creating cxx/datatype/Makefile
config.status: creating cxx/io/Makefile
config.status: creating cxx/init/Makefile
config.status: creating cxx/rma/Makefile
config.status: creating cxx/spawn/Makefile
config.status: creating threads/Makefile
config.status: creating threads/pt2pt/Makefile
config.status: creating threads/util/Makefile
config.status: creating threads/comm/Makefile
config.status: creating errors/Makefile
config.status: creating errors/coll/Makefile
config.status: creating errors/comm/Makefile
config.status: creating errors/group/Makefile
config.status: creating errors/pt2pt/Makefile
config.status: creating errors/rma/Makefile
config.status: creating errors/spawn/Makefile
config.status: creating errors/io/Makefile
config.status: creating errors/cxx/Makefile
config.status: creating errors/cxx/errhan/Makefile
config.status: creating errors/cxx/io/Makefile
config.status: creating errors/f77/Makefile
config.status: creating errors/f90/Makefile
config.status: creating manual/Makefile
config.status: creating manual/manyconnect
config.status: creating perf/Makefile
config.status: creating testlist
config.status: creating cxx/testlist
config.status: creating f77/testlist
config.status: creating f90/testlist
config.status: creating errors/testlist
config.status: creating errors/cxx/testlist
config.status: creating include/mpitestconf.h
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
Configuration completed.